Basic Statistics
Measure | Value |
---|---|
Filename | hcc1395_tumor_rep1_R1.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 390607 |
Total Bases | 58.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTT | 1544 | 0.39528221460444896 | No Hit |
CTACGTTCTCCTACAAATGGACCTTGAGAGCTTGTTTGGAGGTTCTAGCA | 654 | 0.1674317152534389 | No Hit |
GGGAGCAGAGGCAGCTGCCTTTATTGGGGGCCATGGGCTGGCTGATTTCA | 597 | 0.1528390428230933 | No Hit |
GTGGAAAATAACTTTTATTGAGACCCCACCAACTGCAAAATCTGTTCCTG | 594 | 0.15207100743202245 | No Hit |