Basic Statistics
Measure | Value |
---|---|
Filename | hcc1395_tumor_rep2_R2.fq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 390607 |
Total Bases | 58.9 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTCGAAGAGGACGACCATCCCCGATAGAGGAGGACCGGTCTTCGGTCAAG | 2013 | 0.5153517474085206 | No Hit |
GTCTTCTGACAGCTGGTGCGCCTGCCCGGGAACATCCTCCTGGACTCAAT | 1264 | 0.3235989114378391 | No Hit |
CTTCTGACAGCTGGTGCGCCTGCCCGGGAACATCCTCCTGGACTCAATCA | 585 | 0.14976690125881 | No Hit |
ATTTGATGGCGTGATGTCTCACAGAAAGTTCTCCGCTCCCAGACATGGGT | 395 | 0.1011246598243247 | No Hit |