FastQCFastQC Report
Tue 17 May 2022
SRR1039508_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1039508_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22935521
Sequences flagged as poor quality0
Sequence length63
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAA571820.24931633338523243TruSeq Adapter, Index 2 (100% over 51bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)