FastQCFastQC Report
Mon 28 Jul 2025
S28_Skin_HiSeq_cami_sub25k.R2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameS28_Skin_HiSeq_cami_sub25k.R2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25000
Total Bases3.7 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATGGGA100.0071972376144.06
GTGATAC350.0036239861.714299