About this Class

This is the last course in a series of three, designed to answer the question: “I’ve just got my sequence data back from the sequencing center, how do I understand/analyze/work with it?” Course Three: Working with RNA-Seq data Who should take this course: Learners who want to work with Next Gen Sequence Data Pre-requisites: Learners should have beginner level skills working in a Unix environment Learning Objectives: In this class, learners will: Align RNA-Seq reads to a genome with several different alignment programs Visualize aligned RNA-Seq reads with the Integrative Genome Viewer (IGV) Work with SAM and BAM file formats Perform differential expression and functional analysis of RNA-Seq data All classes will be held on WebEx in Amy Stonelake’s Personal Room: https://cbiit.webex.com/meet/stonelakeak This class will be held at 3-4 PM on these days. June 15 June 17 June 22 June 24