Single cell spatial and chemical transcriptomics with nuclear oligo hashing

About this Class

ZoomGov link for all the individual meetings and the seminar: https://nih.zoomgov.com/j/1619988709?pwd=dEIwM0ExOXFtSjNqd0xmcGJCVEk5QT09 Meeting ID: 161 998 8709 Passcode: 20892 Presenter: Cole Trapnell, Ph.D. Associate Professor Department of Genome Sciences University of Washington Please mark your calendars for our next seminar by Cole Trapnell. He is a familiar name to most genomics researchers, and he actually spent his early years in Maryland. Please note that we are returning to our afternoon time (seminar info below). There are a few openings for a one-on-one meeting with him after his talk. Let me know if you’d like one. Postdocs and students are welcome to join the fellows tea with the speaker right after his talk in the same zoom link as the talk (send me RSVP for my count). Cole Trapnell developed many widely used bioinformatics tools including TopHat, Cufflinks, Bowtie, and Monocle. His group has also co-developed, along with Jay Shendure’s lab, a scalable workflow for single-cell genomics called “combinatorial cellular indexing”. They recently used this approach to construct a transcriptional atlas for the C. elegans nematode and profile organogenesis in the mouse at whole-embryo scale. Myong-Hee Sung, Ph.D. Earl Stadtman Investigator Chief, Transcription Systems Dynamics and Biology Unit Laboratory of Molecular Biology and Immunology National Institute on Aging NIH 251 Bayview Boulevard, Room 06C226 Baltimore, MD 21224 Office: 410-558-8475 email: sungm@mail.nih.gov