ncibtep@nih.gov

Bioinformatics Training and Education Program

BTEP Question Forum

BTEP maintains several Question and Answer Forums of interest to the NCI/CCR community.
Currently, there are forums on these topics listed below:

If you wish to ask a question go to the Ask Question Page and submit your question.

 Back to Questions

Peak calling and analyses: What peak caller is good for broad peaks?

What peak caller is good for broad peaks?

1

1 Answer:


I like Sicer for broad peaks. It needs to be tuned to a particular data set, but it handles large domains and high background better than most of the tools I have seen. - answered by Tovah Markowitz, Paul Schaughency, Vishal Koparde.


Answered on June 5th, 2020 by