AI Club: Gene Set Analysis with Large Language Models

About this Class

Gene set analysis (GSA) is essential in genomic research, yet traditional methods often lack transparency and produce contextually irrelevant results, making interpretation challenging. While large language models (LLMs) offer a promising solution for result interpretation, they frequently hallucinate, reducing reliability. To address this, we develop a language agent that autonomously interacts with biological databases to enhance accuracy and interpretability. Benchmarking on diverse datasets demonstrates significant improvements over vanilla LLMs.

AI Club is a weekly meeting that explores various topics relating to AI and deep learning in biomedical sciences, typically in a seminar, workshop, or journal club format. AI Club is intended to be accessible to experts and non-experts alike. We currently meet in the Building 10 Library Training Room on Mondays from 11 - 12. IT IS STRONGLY RECOMMENDED TO COME IN PERSON.