AmpliconSuite and AmpliconRepository: Enabling ecDNA Biology at Scale
To Know
Where:
Online
Organizer:
CBIIT
Presented By:
Jens Luebeck PhD (UCSD)
About this Class
Attend this webinar and learn about a genomics data toolkit, AmpliconSuite, and its companion research platform, AmpliconRepository.
UC San Diego’s Dr. Jens Luebeck will review:
- the biological motivation of extrachromosomal DNA (ecDNA) and how AmpliconSuite can reveal the mechanistic preferences of ecDNA formation across different cancer types.
- AmpliconSuite’s computational workflow for analyzing focal amplifications from whole-genome sequencing data.
- the AmpliconRepository where researchers can share and explore focal amplifications, and how to use this data platform to answer research questions.
- new biological findings that come out of analyzing focal amplifications in large numbers of samples.