Bulk RNA Sequencing Analyis using Partek Flow

About this Class

Partek Flow enables scientists to construct analysis workflows for multi-omics sequencing data including DNA, bulk and single cell RNA, spatial transcriptomics, ATAC and ChIP. It is a point-and-click software hosted on Biowulf, the NIH high performance computing system and suitable for those without programming knowledge to conduct analyses while still utilizing Biowulf’s immense compute power. This class introduces bulk RNA sequencing analysis using this software. Topics discussed will range from uploading FASTQ files to the NIH Partek Flow server to differential gene expression analysis as well as construction of data visualizations.  This class is a demo and not hands-on. Experience using or access to Partek Flow is not required to participate.

Note regarding Partek Flow availability at NIH

• NCI scientists, please use the NCI-wide Partek Flow license. See https://bioinformatics.ccr.cancer.gov/docs/getting-started-with-partek-flow/ to learn how to get access.
• NHGRI researchers can inquire about their institutional licesne. See https://research.nhgri.nih.gov/bi-training.shtml for details.
• Others at NIH can inquire with the NIH Library (https://www.nihlibrary.nih.gov/resources/tools/partek-flow)

Meeting link:
https://cbiit.webex.com/cbiit/j.php?MTID=mb5c882975a7558efba68f7a787f81390 
Meeting number:
2317 349 2168
Password:
VpANffw@652

Join by video system
Dial 23173492168@cbiit.webex.com
You can also dial 173.243.2.68 and enter your meeting number.

Join by phone
1-650-479-3207 Call-in number (US/Canada)
Access code: 2317 349 2168