ncibtep@nih.gov

Bioinformatics Training and Education Program

Hands-on: Copy Number Analysis and its Application to Genomic Research Using Nexus Copy Number

Hands-on: Copy Number Analysis and its Application to Genomic Research Using Nexus Copy Number

 When: Oct. 23rd, 2012 2:00 pm - 5:00 pm

To Know

Where:
In-Person
Organizer:
BTEP
Presented By:
Zhiwei Che, PhD (Director of Application Science, BioDiscovery)
This class has ended.
Video Archive *Class recordings may take ~48 hours to become available.

About this Class

Learn the fundamentals in genomic data analysis of CGH and SNP arrays using BioDiscovery Nexus Copy Number software.  In this hands-on training session, you will learn how to load, process, visualize, and analyze array data. You will learn how to effectively use the features within the software to efficiently and quickly explore the data to gain biological insights from copy number and allelic event changes in the genome.

  • Data Loading and processing
  • Visualization of results and exporting
  • Population and Sub-population analysis
  • Gene Enrichment Analysis
  • Clustering samples
  • Comparing differences between populations
  • Predictive power analysis
  • Survival predictive power and K-M plot/statistics
  • Nexus DB