Hands-on with the Broad Institute’s Gene Set Enrichment Analysis (GSEA) software
When: Apr. 23rd, 2013 2:00 pm - 5:00 pm
To Know
- Where: 6116 Executive Blvd., Room 4075
- Organized By: BTEP
About this Class
Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes).
The GSEA software is a Java based tool freely available from the Broad Institute of MIT and Harvard.
This training class will walk you through getting the most out of this software.
Topics to include:
- Installing GSEA
- Required input data files and formats
- Parameter selection
- Broad Institute Utilities
- Understanding the output
Tuesday April 16th, 2013 there will be a companion lecture session on GSEA
Class Notes
Class Data