About this Class

Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statistically significant, concordant differences between two biological states (e.g. phenotypes). 
The GSEA software is a Java based tool freely available from the Broad Institute of MIT and Harvard. 
This training class will walk you through getting the most out of this software.
Topics to include:

• Installing GSEA
• Required input data files and formats
• Parameter selection
• Broad Institute Utilities
• Understanding the output

 
Tuesday April 16th, 2013 there will be a companion lecture session on GSEA
 
Class Notes
 
Class Data