About this Class

The training will overview the current status of pathway tools, with focus on software available to NIH community.  It will discuss the biological interoperation of mutation and expression data in the context of pathways, pathway databases, and popular web-based pathway tools. The pathway software GSEA, g: Profiler, and PATHVIEW will be used to demonstrate how to run the pathway analysis of expression data against GO (Gene Ontology), KEGG (Kyoto Encyclopedia of Genes and Genomes), and MSigDB (Molecular Signatures Database).