ncibtep@nih.gov

Bioinformatics Training and Education Program

Qiagen CLC Genomics Workbench: bulk RNA sequencing

Qiagen CLC Genomics Workbench: bulk RNA sequencing

 When: May. 16th, 2024 1:00 pm - 2:30 pm

Learning Level: Any

To Know
  • Where: Online Webinar
  • Presented By: Joe Wu (BTEP), Shawn Prince (Qiagen)

About this Class

Qiagen CLC Genomics Workbench is a point-and-click bioinformatics software that runs on a personal computer and enables bulk RNA sequencing, ChIP sequencing, long reads, and variant analysis. This software is available to NCI scientists.

This hands-on training will guide participants through bulk RNA sequencing analysis using CLC Genomics Workbench. After the class, participants will be able to

  • Import files and illumina reads
  • Import and associate metadata with samples
  • Download reference genome and annotation
  • Obtain RNA sequencing expression counts and perform differential expression analysis
  • Construct PCA and heatmap to visualize RNA sequencing data

 

To get the most of this hands-on session, please reach out to the NCI service desk (https://service.cancer.gov/ncisp) to get this software installed, preview the tutorial (https://resources.qiagenbioinformatics.com/tutorials/RNASeq-droso.pdf), and download the example dataset (http://resources.qiagenbioinformatics.com/testdata/RNA_Seq_Droso2.zip) prior to attending.

Meeting link:
https://cbiit.webex.com/cbiit/j.php?MTID=m07f826d16b67d3c3b8a86e275ebac5a5
Meeting number:
2300 281 6121
Password:
e7aEqhpy@34

Join by video system
Dial 23002816121@cbiit.webex.com
You can also dial 173.243.2.68 and enter your meeting number.

Join by phone
1-650-479-3207 Call-in number (US/Canada)
Access code: 2300 281 6121