Qiagen CLC Genomics Workbench: bulk RNA sequencing

About this Class

Qiagen CLC Genomics Workbench is a point-and-click bioinformatics software that runs on a personal computer and enables bulk RNA sequencing, ChIP sequencing, long reads, and variant analysis. NCI scientists can use CLC Genomics Workbench through the NCI institutional license, just submit a ticket with service.cancer.gov to get it installed on personal computer. Others at NIH can inquire with the NIH Library (https://www.nihlibrary.nih.gov/resources/tools/clc-genomics-workbench) about using this package.

This hands-on training will guide participants through bulk RNA sequencing analysis using CLC Genomics Workbench. After the class, participants will be able to

• Import files and illumina reads
• Import and associate metadata with samples
• Download reference genome and annotation
• Obtain RNA sequencing expression counts and perform differential expression analysis
• Construct PCA and heatmap to visualize RNA sequencing data

To get the most of this hands-on session, please reach out to the NCI service desk (https://service.cancer.gov/ncisp) to get this software installed, preview the tutorial (https://resources.qiagenbioinformatics.com/tutorials/RNASeq-droso.pdf), and download the example dataset (http://resources.qiagenbioinformatics.com/testdata/RNA_Seq_Droso2.zip) prior to attending.

Meeting link:
https://cbiit.webex.com/cbiit/j.php?MTID=m07f826d16b67d3c3b8a86e275ebac5a5
Meeting number:
2300 281 6121
Password:
e7aEqhpy@34

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Access code: 2300 281 6121