ncibtep@nih.gov

Bioinformatics Training and Education Program

Variant Analysis: Experimental Design, Pipelines and Downstream Analysis

Variant Analysis: Experimental Design, Pipelines and Downstream Analysis

 When: Apr. 29th, 2021 1:00 pm - 2:00 pm

This class has ended.
Video Archive *Class recordings may take ~48 hours to become available.
To Know
  • Where: Online Webinar
  • Organized By: BTEP
  • Presented By: Justin Lack (NIAID CBR)

About this Class

BTEP_April29_2021 Slides Recording
  1. Experimental Design Considerations in Variant Analysis
    1. Germline vs Somatic
    2. WGS vs WES
    3. Sample sizes and statistical power
  3. WGS/WES Pipelines at NIH
    1. Pipeline performance
    2. Using Pipeliner for internal and external data
  4. Variant QC, Annotation and Downstream Analysis
    1. Variant QC and data correction
    2. Variant annotation and analysis tools
  5. Structural variation and multi-omic integration