ncibtep@nih.gov

Bioinformatics Training and Education Program

Qiagen IPA Pathway Analysis Online Webinars and Training in April

These trainings are offered by Qiagen, not BTEP, and are listed here for your convenience.
(Last updated April 5,2024)
  • Apr. 11 @ 1 PM, Gene set enrichment, target validation and more using high quality biomedical literature findings

Register

This 60-minute session will teach you how to effectively use a relationship database for various applications. QIAGEN Biomedical Knowledge Base (Biomedical KB), a database containing high-quality relationship literature findings, the same database backing Ingenuity Pathway Analysis/IPA) will be used, but learnings can also be applied to similar databases.
 
The following points will be discussed:
 
• Gene set enrichment analysis using Biomedical KB
• Target validation through Biomedical KB findings
• Potential other use cases, queries and applications requested by registrants
 
  • Apr. 23 @ 1 PM, DNA-seq analyses (whole genome, whole exome, panel) using QIAGEN CLC Genomics Workbench

Register

In this training, we’ll go over how to easily perform DNA-seq analyses (for whole genome, whole exome, panel and similar) easily and effectively using QIAGEN CLC Genomics Workbench. Together, we’ll explore:

• Read mapping

• Variant calling (SNPs, mutations, Indels and more)

• Annotations and filters • Genome Browser Please bring any questions you may have, and we will answer them during this training.

To learn more about CLC Genomics Workbench or request for a trial: https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/analysis-and-visualization/qiagen-clc-workbench-premium/?cmpid=CM_QDI_DISC_042024webinars-DNAseq

  • Apr. 30 @ 1 PM, IPA deep dive: miRNA investigation using QIAGEN Ingenuity Pathway Analysis (IPA)

Register

In this 90-minute training session, you will learn how to identify target mRNAs for your miRNAs of interest and associate them with pathways, diseases, biological functions, tissues and cell types.

Topics that will be covered include:

• How to analyze miRNA-seq datasets alone or both miRNA and corresponding mRNA datasets together

• How to use QIAGEN IPA without a dataset, using miRNA IDs

• Introduction to databases and curated content specific to miRNA

• How to effectively apply various filters and functionalities to identify biomarkers, key targets and biological mechanisms

To learn more about IPA or request for a trial: https://digitalinsights.qiagen.com/products-overview/discovery-insights-portfolio/analysis-and-visualization/qiagen-ipa/?cmpid=CM_QDI_DISC_042024webinars-miRNA