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Bioinformatics Training and Education Program

BTEP: Single Cell RNA Seq Analysis Workshop, Part II

BTEP: Single Cell RNA Seq Analysis Workshop, Part II

 When: Oct. 10th, 2019 10:00 am - 3:00 pm

This class has ended.
Video Archive *Class recordings may take ~48 hours to become available.
To Know
  • Where: Building 37, Room 4041/4107
  • Organized By: BTEP
  • Presented By: Cihan Oguz (NCBR), Vicky Chen (NCBR), Nathan Wong (CCBR), Abdalla Abdelmaksoud (CCBR)
  • Files

About this Class

Multiple sample analysis, data integration across multiple experiments, and technologies 10:00 – 11:00 AM scRNA-seq batch effect correction, differential analysis,  gene set enrichment and network analysis (Abdalla Abdelmaksoud, Vicky Chen) 11:05 – 12:00 PM Trajectory analysis (Abdalla Abdelmaksoud) 1:00 –   2:30 PM Single cell integrative analysis from multiple technologies (CITE-seq, cell hashing, VDJ analysis, scATAC-seq) (Nathan Wong, Cihan Oguz, and Keyur Talsania) 2:30 - 3:00 PM Panel Discussion (Q & A) If unable to join in person, WebEx will be provided.
Meeting number (access code): 732 159 036
Meeting password: 44iZDNP*
Thursday, October 10, 2019
10:00 am  |  (UTC-05:00) Eastern Time (US & Canada)  |  5 hrs
Join
Join by phone
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1-650-479-3207 Call-in toll number (US/Canada)
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Dial 732159036@cbiit.webex.com
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The link to the WebEx recording of this event is here: https://cbiit.webex.com/webappng/sites/cbiit/recording/play/7321cf28c97346b8a0b6dc258a0d40a8  

Files

  • btep_AA_Trajectory-Analysis.pdf: |
  • CITESeq-NW.pdf: |
  • Single-Cell-BTEP-MultiSample-Analysis-VC.pdf: |
  • cihan_cell_hashing_slides_oct10_fnl.pdf: |
  • scATAC_BTEP_desktop_KT.pdf: |